Transcript: ENSRNOT00000026514.10 Smg5-201

Description

SMG5 nonsense mediated mRNA decay factor [Source:RGD Symbol;Acc:1584731]

Gene Synonyms

LOC681012

Location

About this transcript

This transcript has 22 exons, is annotated with 27 domains and features, is associated with 154 variant alleles and maps to 303 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000026514.10	Smg5-201	4449	1010aa	ENSRNOP00000026514.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9PU03	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000138264.1	Smg5-202	4328	992aa	ENSRNOP00000111155.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 22, Coding exons: 22, Transcript length: 4,449 bps, Translation length: 1,010 residues

Version

ENSRNOT00000026514.10

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.