Transcript: ENSRNOT00000026258.7 Tef-201

Description

TEF transcription factor, PAR bZIP family member [Source:RGD Symbol;Acc:3841]

Gene Synonyms

LOC100910463

Location

About this transcript

This transcript has 4 exons, is annotated with 18 domains and features, is associated with 14 variant alleles and maps to 176 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000026258.7	Tef-201	4161	301aa	ENSRNOP00000026258.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P41224	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000107707.1	Tef-202	4122	285aa	ENSRNOP00000081617.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZT24	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 4,161 bps, Translation length: 301 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P41224

Version

ENSRNOT00000026258.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.