Transcript: ENSRNOT00000026184.6 Ltbr-201

Description

lymphotoxin beta receptor [Source:RGD Symbol;Acc:1309448]

Gene Synonyms

LOC297604, MGC94657

Location

Primary_assembly 4: 159,795,115-159,801,516 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 40 domains and features, is associated with 104 variant alleles and maps to 164 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000019264.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000172974.1	Ltbr-204	2456	572aa	ENSRNOP00000106561.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000114935.2	Ltbr-202	2342	436aa	ENSRNOP00000092482.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GJT5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000149680.1	Ltbr-203	2085	391aa	ENSRNOP00000111884.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000026184.6	Ltbr-201	2072	415aa	ENSRNOP00000026184.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7FAR8	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,072 bps, Translation length: 415 residues

Version

ENSRNOT00000026184.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Upcoming Ensembl Platform Transition

Transcript: ENSRNOT00000026184.6 Ltbr-201

Summary

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Transcript: ENSRNOT00000026184.6 Ltbr-201

Summary

About Us

Get help

Our sister sites

Follow us