Transcript: ENSRNOT00000026112.7 Psd2-201

Description

pleckstrin and Sec7 domain containing 2 [Source:RGD Symbol;Acc:1311075]

Gene Synonyms

LOC307500

Location

Primary_assembly 18: 27,839,627-27,890,708 forward strand.

About this transcript

This transcript has 16 exons, is annotated with 36 domains and features, is associated with 205 variant alleles and maps to 165 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000019177.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000151796.1	Psd2-203	4630	833aa	ENSRNOP00000100216.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000123284.1	Psd2-202	4406	789aa	ENSRNOP00000103034.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000026112.7	Psd2-201	4400	772aa	ENSRNOP00000026112.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4ACB6	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 16, Coding exons: 15, Transcript length: 4,400 bps, Translation length: 772 residues

Version

ENSRNOT00000026112.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Upcoming Ensembl Platform Transition

Transcript: ENSRNOT00000026112.7 Psd2-201

Summary

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Transcript: ENSRNOT00000026112.7 Psd2-201

Summary

About Us

Get help

Our sister sites

Follow us