Transcript: ENSRNOT00000026100.7 Shank1-201

Description

SH3 and multiple ankyrin repeat domains 1 [Source:RGD Symbol;Acc:621011]

Gene Synonyms

Shank1a, Spank1, Sstrip

Location

About this transcript

This transcript has 25 exons, is annotated with 107 domains and features, is associated with 101 variant alleles and maps to 304 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000026100.7	Shank1-201	7583	2167aa	ENSRNOP00000026100.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9WV48-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 25, Coding exons: 24, Transcript length: 7,583 bps, Translation length: 2,167 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9WV48

Version

ENSRNOT00000026100.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.