Transcript: ENSRNOT00000025949.8 Clec11a-201

Description

C-type lectin domain containing 11A [Source:RGD Symbol;Acc:3627]

Gene Synonyms

Scgf

Location

About this transcript

This transcript has 5 exons, is annotated with 11 domains and features, is associated with 37 variant alleles and maps to 156 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000130520.1	Clec11a-203	2322	373aa	ENSRNOP00000108820.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000143798.1	Clec11a-205	2125	339aa	ENSRNOP00000101032.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000113316.2	Clec11a-202	2124	368aa	ENSRNOP00000087157.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A7X7	-
ENSRNOT00000025949.8	Clec11a-201	2079	353aa	ENSRNOP00000025949.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O88201	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000141755.1	Clec11a-204	1194	318aa	ENSRNOP00000108012.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 2,079 bps, Translation length: 353 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O88201

Version

ENSRNOT00000025949.8

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.