Transcript: ENSRNOT00000025221.9 Pprc1-201

Description

PPARG related coactivator 1 [Source:RGD Symbol;Acc:1309688]

Gene Synonyms

LOC294007

Location

Primary_assembly 1: 254,851,164-254,867,570 forward strand.

About this transcript

This transcript has 14 exons, is annotated with 46 domains and features, is associated with 122 variant alleles and maps to 205 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000018561.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000025221.9	Pprc1-201	5231	1639aa	ENSRNOP00000025222.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZRG8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000135416.1	Pprc1-203	5160	1629aa	ENSRNOP00000109673.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000131402.1	Pprc1-202	5126	1604aa	ENSRNOP00000108950.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 5,231 bps, Translation length: 1,639 residues

Version

ENSRNOT00000025221.9

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Upcoming Ensembl Platform Transition

Transcript: ENSRNOT00000025221.9 Pprc1-201

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Transcript: ENSRNOT00000025221.9 Pprc1-201

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