Transcript: ENSRNOT00000025079.8 Smad1-201

Description

SMAD family member 1 [Source:RGD Symbol;Acc:3030]

Gene Synonyms

Madh1, SMAD 1

Location

Primary_assembly 19: 45,417,433-45,477,957 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 23 domains and features, is associated with 236 variant alleles and maps to 262 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000018483.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000025079.8	Smad1-201	3132	483aa	ENSRNOP00000025079.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JSQ6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000136882.1	Smad1-203	3261	468aa	ENSRNOP00000102689.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IYI3	-
ENSRNOT00000104934.2	Smad1-202	3093	412aa	ENSRNOP00000083295.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6G8R6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 3,132 bps, Translation length: 483 residues

Version

ENSRNOT00000025079.8

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSRNOT00000025079.8 Smad1-201

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Transcript: ENSRNOT00000025079.8 Smad1-201

Summary

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