Transcript: ENSRNOT00000024918.7 Apoa5-201

Description

apolipoprotein A5 [Source:RGD Symbol;Acc:70903]

Gene Synonyms

MGC108612, apo-AV, apoA-V

Location

Primary_assembly 8: 55,458,022-55,460,507 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 15 domains and features, is associated with 35 variant alleles and maps to 99 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000018436.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000102490.2	Apoa5-202	1993	395aa	ENSRNOP00000094966.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ASM1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000142562.1	Apoa5-203	2074	393aa	ENSRNOP00000104537.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000173732.1	Apoa5-204	2008	137aa	ENSRNOP00000101588.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000024918.7	Apoa5-201	1842	391aa	ENSRNOP00000024918.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0H2UHP7 A6J475	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,842 bps, Translation length: 391 residues

Version

ENSRNOT00000024918.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSRNOT00000024918.7 Apoa5-201

Summary

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Transcript: ENSRNOT00000024918.7 Apoa5-201

Summary

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