Transcript: ENSRNOT00000024430.7 Vim-201

Description

vimentin [Source:RGD Symbol;Acc:621646]

Location

Primary_assembly 17: 81,576,923-81,585,742 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 26 domains and features, is associated with 139 variant alleles and maps to 199 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000018087.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000144777.1	Vim-203	2054	499aa	ENSRNOP00000103318.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000024430.7	Vim-201	1793	466aa	ENSRNOP00000024430.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JM43 G3V8C3	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000136197.1	Vim-202	1365	427aa	ENSRNOP00000102849.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 1,793 bps, Translation length: 466 residues

Version

ENSRNOT00000024430.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Upcoming Ensembl Platform Transition

Transcript: ENSRNOT00000024430.7 Vim-201

Summary

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Transcript: ENSRNOT00000024430.7 Vim-201

Summary

About Us

Get help

Our sister sites

Follow us