Transcript: ENSRNOT00000023763.9 Ptpn2-201

Description

protein tyrosine phosphatase, non-receptor type 2 [Source:RGD Symbol;Acc:620710]

Location

About this transcript

This transcript has 11 exons, is annotated with 22 domains and features, is associated with 210 variant alleles and maps to 175 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000110632.2	Ptpn2-202	1681	410aa	ENSRNOP00000093687.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AMA6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000023763.9	Ptpn2-201	1578	385aa	ENSRNOP00000023763.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QCH4	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,578 bps, Translation length: 385 residues

Version

ENSRNOT00000023763.9

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.