Transcript: ENSRNOT00000022960.8 Snx1-201

Description

sorting nexin 1 [Source:RGD Symbol;Acc:68935]

Gene Synonyms

MGC105373

Location

About this transcript

This transcript has 15 exons, is annotated with 26 domains and features, is associated with 167 variant alleles and maps to 212 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000099946.2	Snx1-202	2031	522aa	ENSRNOP00000088585.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A6U3 A6J5H5 Q99N27	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000110848.2	Snx1-203	2006	474aa	ENSRNOP00000076840.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y518	-
ENSRNOT00000022960.8	Snx1-201	1980	505aa	ENSRNOP00000022960.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QBU0	-
ENSRNOT00000154143.1	Snx1-204	1574	497aa	ENSRNOP00000106474.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 1,980 bps, Translation length: 505 residues

Version

ENSRNOT00000022960.8

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.