Transcript: ENSRNOT00000022951.7 Plxna1-201

Description

plexin A1 [Source:RGD Symbol;Acc:1560871]

Gene Synonyms

LOC362398, RGD1560871

Location

About this transcript

This transcript has 38 exons, is annotated with 53 domains and features, is associated with 351 variant alleles and maps to 451 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000101968.1	Plxna1-202	11199	1995aa	ENSRNOP00000092615.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AGW9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000022951.7	Plxna1-201	9695	1912aa	ENSRNOP00000022951.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3Z981	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 38, Coding exons: 31, Transcript length: 9,695 bps, Translation length: 1,912 residues

Version

ENSRNOT00000022951.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.