Transcript: ENSRNOT00000022271.7 Gtf3c1-201

Description

general transcription factor IIIC subunit 1 [Source:RGD Symbol;Acc:621048]

Gene Synonyms

LOC102554566

Location

About this transcript

This transcript has 37 exons, is annotated with 28 domains and features, is associated with 317 variant alleles and maps to 366 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000099818.1	Gtf3c1-202	6433	2126aa	ENSRNOP00000097490.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AWF1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000022271.7	Gtf3c1-201	6905	2102aa	ENSRNOP00000022271.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LNV7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 37, Coding exons: 37, Transcript length: 6,905 bps, Translation length: 2,102 residues

Version

ENSRNOT00000022271.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.