Transcript: ENSRNOT00000022107.4 Ptbp3-201

Description

polypyrimidine tract binding protein 3 [Source:RGD Symbol;Acc:621671]

Gene Synonyms

Rod1

Location

About this transcript

This transcript has 14 exons, is annotated with 27 domains and features, is associated with 107 variant alleles and maps to 231 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000089251.2	Ptbp3-202	5513	541aa	ENSRNOP00000069354.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JV54	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000022107.4	Ptbp3-201	5387	520aa	ENSRNOP00000022107.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2UJS5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000116337.1	Ptbp3-203	5226	457aa	ENSRNOP00000092713.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AIH3	-
ENSRNOT00000118205.1	Ptbp3-204	408	130aa	ENSRNOP00000084394.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A1W2	-

Summary

Statistics

Exons: 14, Coding exons: 13, Transcript length: 5,387 bps, Translation length: 520 residues

Version

ENSRNOT00000022107.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.