Transcript: ENSRNOT00000020721.7 Lsm1-201

Description

LSM1 homolog, mRNA degradation associated [Source:RGD Symbol;Acc:1304967]

Gene Synonyms

LOC364624

Location

About this transcript

This transcript has 4 exons, is annotated with 9 domains and features, is associated with 52 variant alleles and maps to 129 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000141067.1	Lsm1-203	1380	239aa	ENSRNOP00000110697.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000156554.1	Lsm1-204	1266	21aa	ENSRNOP00000109581.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000020721.7	Lsm1-201	1216	133aa	ENSRNOP00000020721.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IW03 D3ZWB1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000118602.2	Lsm1-202	1140	159aa	ENSRNOP00000089972.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GHU0	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,216 bps, Translation length: 133 residues

Version

ENSRNOT00000020721.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.