Transcript: ENSRNOT00000020580.8 Shoc2-201

Description

SHOC2 leucine-rich repeat scaffold protein [Source:RGD Symbol;Acc:1308146]

Gene Synonyms

LOC309548

Location

About this transcript

This transcript has 11 exons, is annotated with 59 domains and features, is associated with 156 variant alleles and maps to 231 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000020580.8	Shoc2-201	3609	582aa	ENSRNOP00000020580.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JHX2 Q6AYI5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 11, Coding exons: 8, Transcript length: 3,609 bps, Translation length: 582 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6AYI5

Version

ENSRNOT00000020580.8

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.