secretogranin II [Source:RGD Symbol;Acc:3626]
Chcg, sgII
Primary_assembly 9: 88,251,481-88,256,904 reverse strand.
This transcript has 3 exons, is annotated with 15 domains and features, is associated with 68 variant alleles and maps to 117 oligo probes.
This transcript is a product of gene ENSRNOG00000015055.8 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSRNOT00000167100.1 | Scg2-208 | 5273 | 619aa | ENSRNOP00000099975.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A6JW74 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, |
| ENSRNOT00000166173.1 | Scg2-207 | 3280 | 619aa | ENSRNOP00000104795.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A6JW74 | APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, |
| ENSRNOT00000168776.1 | Scg2-209 | 3278 | 619aa | ENSRNOP00000102163.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A6JW74 | APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, |
| ENSRNOT00000112421.2 | Scg2-203 | 3080 | 619aa | ENSRNOP00000089801.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8I6A821 A6JW74 | APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, |
| ENSRNOT00000125596.1 | Scg2-204 | 2919 | 619aa | ENSRNOP00000100352.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A6JW74 | APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, |
| ENSRNOT00000147411.1 | Scg2-206 | 2762 | 619aa | ENSRNOP00000111363.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A6JW74 | APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, |
| ENSRNOT00000142296.1 | Scg2-205 | 2627 | 619aa | ENSRNOP00000100467.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A6JW74 | APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, |
| ENSRNOT00000105728.2 | Scg2-202 | 2476 | 619aa | ENSRNOP00000078659.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8I6A821 A6JW74 | APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, |
| ENSRNOT00000020219.5 | Scg2-201 | 2285 | 579aa | ENSRNOP00000020219.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V7X2 | - |