Transcript: ENSRNOT00000019931.9 Synpo2-201

Description

synaptopodin 2 [Source:RGD Symbol;Acc:1564779]

Gene Synonyms

LOC499702, RGD1564779

Location

About this transcript

This transcript has 5 exons, is annotated with 38 domains and features, is associated with 919 variant alleles and maps to 120 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000019931.9	Synpo2-201	4639	1172aa	ENSRNOP00000019931.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QB32	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 4,639 bps, Translation length: 1,172 residues

Version

ENSRNOT00000019931.9

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.