Transcript: ENSRNOT00000019893.8 Shprh-201

Description

SNF2 histone linker PHD RING helicase [Source:RGD Symbol;Acc:1310342]

Gene Synonyms

LOC308282

Location

Primary_assembly 1: 7,349,158-7,422,794 forward strand.

About this transcript

This transcript has 31 exons, is annotated with 45 domains and features, is associated with 374 variant alleles and maps to 293 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000014450.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000111484.2	Shprh-203	7450	1814aa	ENSRNOP00000084462.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A1C4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000019893.8	Shprh-201	6996	1701aa	ENSRNOP00000019893.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JP42 D4A9B2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000088292.3	Shprh-202	6808	1653aa	ENSRNOP00000071936.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K1Q2	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 31, Coding exons: 30, Transcript length: 6,996 bps, Translation length: 1,701 residues

Version

ENSRNOT00000019893.8

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSRNOT00000019893.8 Shprh-201

Summary

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Transcript: ENSRNOT00000019893.8 Shprh-201

Summary

About Us

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