Transcript: ENSRNOT00000019713.8 Tgoln2-201

Description

trans-golgi network protein 2 [Source:RGD Symbol;Acc:620445]

Gene Synonyms

MGC108592, Tgn38, Tgoln1, Ttgn1

Location

Primary_assembly 4: 106,221,509-106,229,262 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 35 domains and features, is associated with 64 variant alleles and maps to 222 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000014617.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000019713.8	Tgoln2-201	4713	357aa	ENSRNOP00000019713.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IAD1 P19814	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000115005.2	Tgoln2-202	4689	349aa	ENSRNOP00000096733.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AQW2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000117115.2	Tgoln2-203	1045	343aa	ENSRNOP00000083644.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZZM8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 4,713 bps, Translation length: 357 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P19814

Version

ENSRNOT00000019713.8

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSRNOT00000019713.8 Tgoln2-201

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Transcript: ENSRNOT00000019713.8 Tgoln2-201

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