Transcript: ENSRNOT00000019180.8 Map4k4-201

Description

mitogen-activated protein kinase kinase kinase kinase 4 [Source:RGD Symbol;Acc:1305322]

Gene Synonyms

LOC301363

Location

Primary_assembly 9: 49,696,700-49,822,353 forward strand.

About this transcript

This transcript has 31 exons, is annotated with 45 domains and features, is associated with 850 variant alleles and maps to 325 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000014013.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000083322.3	Map4k4-202	6069	1382aa	ENSRNOP00000074373.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K7W4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000115451.2	Map4k4-205	6069	1382aa	ENSRNOP00000078890.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZLV4	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000111572.2	Map4k4-204	5907	1328aa	ENSRNOP00000085187.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZYP2	-
ENSRNOT00000019180.8	Map4k4-201	5877	1318aa	ENSRNOP00000019180.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1M754	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000115768.2	Map4k4-206	5745	1274aa	ENSRNOP00000092349.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AHN7	-
ENSRNOT00000102257.2	Map4k4-203	5484	1187aa	ENSRNOP00000097771.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AT99	-

Summary

Statistics

Exons: 31, Coding exons: 31, Transcript length: 5,877 bps, Translation length: 1,318 residues

Version

ENSRNOT00000019180.8

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSRNOT00000019180.8 Map4k4-201

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Transcript: ENSRNOT00000019180.8 Map4k4-201

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