Transcript: ENSRNOT00000019025.10 Tp53bp1-201

Description

tumor protein p53 binding protein 1 [Source:RGD Symbol;Acc:1308039]

Gene Synonyms

LOC296099, Trp53bp1

Location

Primary_assembly 3: 128,623,726-128,696,747 reverse strand.

About this transcript

This transcript has 28 exons, is annotated with 70 domains and features, is associated with 256 variant alleles and maps to 264 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000013837.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000019025.10	Tp53bp1-201	6215	1972aa	ENSRNOP00000019025.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1M842	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000128902.1	Tp53bp1-204	6325	1928aa	ENSRNOP00000104581.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000107143.2	Tp53bp1-203	6095	1932aa	ENSRNOP00000093681.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AKV2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000141208.1	Tp53bp1-205	6065	1922aa	ENSRNOP00000105803.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000106843.2	Tp53bp1-202	6002	1944aa	ENSRNOP00000090164.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AB98	-

Summary

Statistics

Exons: 28, Coding exons: 28, Transcript length: 6,215 bps, Translation length: 1,972 residues

Version

ENSRNOT00000019025.10

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSRNOT00000019025.10 Tp53bp1-201

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Transcript: ENSRNOT00000019025.10 Tp53bp1-201

Summary

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