Transcript: ENSRNOT00000018521.8 Trpm3-201

Description

transient receptor potential cation channel, subfamily M, member 3 [Source:RGD Symbol;Acc:1304888]

Gene Synonyms

LOC309407

Location

Primary_assembly 1: 229,435,311-229,984,172 forward strand.

About this transcript

This transcript has 26 exons, is annotated with 42 domains and features, is associated with 3647 variant alleles and maps to 221 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000027770.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000114800.2	Trpm3-206	7008	1744aa	ENSRNOP00000093587.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ALW5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000113385.2	Trpm3-204	6978	1734aa	ENSRNOP00000083902.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZWW2	-
ENSRNOT00000145132.1	Trpm3-208	6972	1732aa	ENSRNOP00000111011.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000018521.8	Trpm3-201	6969	1731aa	ENSRNOP00000018521.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LN45	-
ENSRNOT00000109194.2	Trpm3-203	6939	1721aa	ENSRNOP00000084148.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A0P1	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000114759.2	Trpm3-205	5214	1337aa	ENSRNOP00000084016.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A0D5	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000098066.2	Trpm3-202	1248	263aa	ENSRNOP00000081604.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6G666	-
ENSRNOT00000115994.2	Trpm3-207	1161	234aa	ENSRNOP00000094201.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GL22	-

Summary

Statistics

Exons: 26, Coding exons: 26, Transcript length: 6,969 bps, Translation length: 1,731 residues

Version

ENSRNOT00000018521.8

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSRNOT00000018521.8 Trpm3-201

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Transcript: ENSRNOT00000018521.8 Trpm3-201

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