Transcript: ENSRNOT00000018318.5 S1pr1-201

Description

sphingosine-1-phosphate receptor 1 [Source:RGD Symbol;Acc:61958]

Gene Synonyms

EDG1 (Edg1), Edg1, S1P1

Location

About this transcript

This transcript has 5 exons, is annotated with 59 domains and features, is associated with 2687 variant alleles and maps to 161 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000018318.5	S1pr1-201	17444	383aa	ENSRNOP00000052627.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HV78 P48303	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000144764.1	S1pr1-205	16721	383aa	ENSRNOP00000100933.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HV78	-
ENSRNOT00000140136.1	S1pr1-203	5256	383aa	ENSRNOP00000107206.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HV78	-
ENSRNOT00000172725.1	S1pr1-206	3270	383aa	ENSRNOP00000108446.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HV78	-
ENSRNOT00000125679.1	S1pr1-202	3039	383aa	ENSRNOP00000101281.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HV78	-
ENSRNOT00000142036.1	S1pr1-204	3000	383aa	ENSRNOP00000098635.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HV78	-

Summary

Statistics

Exons: 5, Coding exons: 1, Transcript length: 17,444 bps, Translation length: 383 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P48303

Version

ENSRNOT00000018318.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.