Transcript: ENSRNOT00000017730.7 Sall2-201

Description

spalt-like transcription factor 2 [Source:RGD Symbol;Acc:1309272]

Gene Synonyms

LOC305854

Location

About this transcript

This transcript has 2 exons, is annotated with 60 domains and features, is associated with 36 variant alleles and maps to 134 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000017730.7	Sall2-201	5186	1004aa	ENSRNOP00000017730.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6KEH5 D4ADE6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000078180.3	Sall2-202	5198	942aa	ENSRNOP00000073873.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K6M7	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 5,186 bps, Translation length: 1,004 residues

Version

ENSRNOT00000017730.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.