Transcript: ENSRNOT00000017575.9 Lrp8-201

Description

LDL receptor related protein 8 [Source:RGD Symbol;Acc:1305729]

Gene Synonyms

LOC362558

Location

Primary_assembly 5: 127,792,299-127,860,678 forward strand.

About this transcript

This transcript has 19 exons, is annotated with 119 domains and features, is associated with 422 variant alleles and maps to 185 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000013064.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000112745.2	Lrp8-205	7657	1000aa	ENSRNOP00000087919.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GFL9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000114227.2	Lrp8-206	7573	972aa	ENSRNOP00000094896.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ALZ7	-
ENSRNOT00000096386.2	Lrp8-202	7534	959aa	ENSRNOP00000081536.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZTA7	-
ENSRNOT00000103471.2	Lrp8-203	7276	873aa	ENSRNOP00000088514.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GH61	-
ENSRNOT00000116983.2	Lrp8-208	7027	790aa	ENSRNOP00000082808.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZVL7	-
ENSRNOT00000017575.9	Lrp8-201	3951	941aa	ENSRNOP00000017575.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZE75	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000112075.2	Lrp8-204	3315	729aa	ENSRNOP00000088471.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A6L0	-
ENSRNOT00000116706.2	Lrp8-207	3219	697aa	ENSRNOP00000090752.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AE51	-

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 3,951 bps, Translation length: 941 residues

Version

ENSRNOT00000017575.9

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSRNOT00000017575.9 Lrp8-201

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Transcript: ENSRNOT00000017575.9 Lrp8-201

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