Transcript: ENSRNOT00000017555.7 Nop53-201

Description

NOP53 ribosome biogenesis factor [Source:RGD Symbol;Acc:1303085]

Gene Synonyms

Gltscr2, LOC292624

Location

About this transcript

This transcript has 13 exons, is annotated with 12 domains and features, is associated with 50 variant alleles and maps to 167 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000017555.7	Nop53-201	1573	503aa	ENSRNOP00000017556.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6QLN3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000116606.2	Nop53-202	2478	481aa	ENSRNOP00000096721.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AQV7 A6J887	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 1,573 bps, Translation length: 503 residues

Version

ENSRNOT00000017555.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.