Transcript: ENSRNOT00000017531.9 Pde1c-201

Description

phosphodiesterase 1C [Source:RGD Symbol;Acc:68332]

Location

Primary_assembly 4: 86,631,093-86,902,496 reverse strand.

About this transcript

This transcript has 18 exons, is annotated with 31 domains and features, is associated with 1544 variant alleles and maps to 199 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000012337.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000105428.2	Pde1c-205	3183	863aa	ENSRNOP00000078829.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZM70	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000121103.1	Pde1c-207	3421	788aa	ENSRNOP00000110688.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000118567.2	Pde1c-206	3282	693aa	ENSRNOP00000089783.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A8V6	-
ENSRNOT00000098186.2	Pde1c-203	2993	751aa	ENSRNOP00000096395.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AQQ1	-
ENSRNOT00000098034.2	Pde1c-202	2876	624aa	ENSRNOP00000077659.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y1F5	-
ENSRNOT00000017531.9	Pde1c-201	2864	708aa	ENSRNOP00000017531.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6K105 F1LMX4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000152371.1	Pde1c-209	2819	605aa	ENSRNOP00000105005.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZKK2	-
ENSRNOT00000102583.2	Pde1c-204	2503	768aa	ENSRNOP00000095937.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AMU0	-
ENSRNOT00000146532.1	Pde1c-208	2396	716aa	ENSRNOP00000099233.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000167670.1	Pde1c-210	2210	665aa	ENSRNOP00000099194.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 18, Coding exons: 18, Transcript length: 2,864 bps, Translation length: 708 residues

Version

ENSRNOT00000017531.9

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Upcoming Ensembl Platform Transition

Transcript: ENSRNOT00000017531.9 Pde1c-201

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Transcript: ENSRNOT00000017531.9 Pde1c-201

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