Transcript: ENSRNOT00000017489.4 Spink6-201

Description

serine peptidase inhibitor, Kazal type 6 [Source:RGD Symbol;Acc:1303338]

Gene Synonyms

LOC100910942, LOC100911369, Spink5l1

Location

About this transcript

This transcript has 5 exons, is annotated with 22 domains and features and maps to 87 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000017489.4	Spink6-201	586	105aa	ENSRNOP00000017489.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6KUC6 G3V7Q1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000116763.2	Spink6-202	511	80aa	ENSRNOP00000086998.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GEN6	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 586 bps, Translation length: 105 residues

Version

ENSRNOT00000017489.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.