Transcript: ENSRNOT00000017125.7 Trim55-201

Description

tripartite motif-containing 55 [Source:RGD Symbol;Acc:1306943]

Gene Synonyms

LOC365751, MURF-2, Rnf29, muRF2

Location

About this transcript

This transcript has 10 exons, is annotated with 29 domains and features, is associated with 227 variant alleles and maps to 131 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000017125.7	Trim55-201	2666	545aa	ENSRNOP00000017125.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2UJ67 A6IHB9 Q5PQN5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000094830.2	Trim55-202	2643	537aa	ENSRNOP00000084028.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A0E8	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 2,666 bps, Translation length: 545 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5PQN5

Version

ENSRNOT00000017125.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.