Transcript: ENSRNOT00000017005.7 Nfat5-201

Description

nuclear factor of activated T-cells 5 [Source:RGD Symbol;Acc:1309142]

Gene Synonyms

NF-AT5, Nfat

Location

About this transcript

This transcript has 15 exons, is annotated with 57 domains and features, is associated with 161 variant alleles and maps to 366 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000017005.7	Nfat5-201	13565	1548aa	ENSRNOP00000017005.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZGB1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000094607.2	Nfat5-202	12904	1530aa	ENSRNOP00000083454.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZWM0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 15, Coding exons: 14, Transcript length: 13,565 bps, Translation length: 1,548 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: D3ZGB1

Version

ENSRNOT00000017005.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.