Transcript: ENSRNOT00000016909.9 Dnajc2-201

Description

DnaJ heat shock protein family (Hsp40) member C2 [Source:RGD Symbol;Acc:620524]

Gene Synonyms

MGC105894, MIDA1, Zrf2

Location

Primary_assembly 4: 14,163,838-14,189,662 forward strand.

About this transcript

This transcript has 17 exons, is annotated with 36 domains and features, is associated with 194 variant alleles and maps to 216 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000012392.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000016909.9	Dnajc2-201	2272	668aa	ENSRNOP00000016909.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JSM0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000096397.2	Dnajc2-202	2569	619aa	ENSRNOP00000082213.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6G953	-
ENSRNOT00000142317.1	Dnajc2-205	2413	603aa	ENSRNOP00000100530.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000116435.2	Dnajc2-203	1915	564aa	ENSRNOP00000078600.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZLA9	-
ENSRNOT00000136389.1	Dnajc2-204	1868	508aa	ENSRNOP00000111806.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 17, Coding exons: 17, Transcript length: 2,272 bps, Translation length: 668 residues

Version

ENSRNOT00000016909.9

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSRNOT00000016909.9 Dnajc2-201

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Transcript: ENSRNOT00000016909.9 Dnajc2-201

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