Transcript: ENSRNOT00000016722.5 Egflam-201

Description

EGF-like, fibronectin type III and laminin G domains [Source:RGD Symbol;Acc:1306592]

Gene Synonyms

LOC365691, RGD1306592

Location

About this transcript

This transcript has 22 exons, is annotated with 58 domains and features, is associated with 493 variant alleles and maps to 266 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000104810.1	Egflam-202	3708	1013aa	ENSRNOP00000091969.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GJD5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000016722.5	Egflam-201	3684	1005aa	ENSRNOP00000016722.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3V7M7	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 22, Coding exons: 22, Transcript length: 3,684 bps, Translation length: 1,005 residues

Version

ENSRNOT00000016722.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.