Transcript: ENSRNOT00000016613.6 Casp8-201

Description

caspase 8 [Source:RGD Symbol;Acc:620945]

Gene Synonyms

CASP-8

Location

About this transcript

This transcript has 10 exons, is annotated with 24 domains and features, is associated with 203 variant alleles and maps to 156 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000016613.6	Casp8-201	2345	504aa	ENSRNOP00000016613.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9JHX4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000140357.1	Casp8-202	2426	482aa	ENSRNOP00000103046.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 2,345 bps, Translation length: 504 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9JHX4

Version

ENSRNOT00000016613.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.