Transcript: ENSRNOT00000015890.8 Slc15a1-201

Description

solute carrier family 15 member 1 [Source:RGD Symbol;Acc:621736]

Gene Synonyms

Pept1

Location

About this transcript

This transcript has 24 exons, is annotated with 52 domains and features, is associated with 330 variant alleles and maps to 318 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000015890.8	Slc15a1-201	2905	710aa	ENSRNOP00000015890.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HUK3 F1LMZ1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSRNOT00000097752.2	Slc15a1-202	2856	710aa	ENSRNOP00000093919.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AKI9	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 24, Coding exons: 23, Transcript length: 2,905 bps, Translation length: 710 residues

Version

ENSRNOT00000015890.8

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.