Transcript: ENSRNOT00000015831.8 Pum1-201

Description

pumilio RNA-binding family member 1 [Source:RGD Symbol;Acc:1307190]

Gene Synonyms

LOC362609

Location

About this transcript

This transcript has 22 exons, is annotated with 53 domains and features, is associated with 111 variant alleles and maps to 295 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000015831.8	Pum1-201	5314	1188aa	ENSRNOP00000015831.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3Z8L5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000115266.2	Pum1-203	5074	1110aa	ENSRNOP00000094449.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ALN0	-
ENSRNOT00000103603.2	Pum1-202	5009	1093aa	ENSRNOP00000094824.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ALJ5	-
ENSRNOT00000167373.1	Pum1-205	3916	1154aa	ENSRNOP00000102483.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000127358.1	Pum1-204	3573	1042aa	ENSRNOP00000105503.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000171136.1	Pum1-206	3267	946aa	ENSRNOP00000107308.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 22, Coding exons: 21, Transcript length: 5,314 bps, Translation length: 1,188 residues

Version

ENSRNOT00000015831.8

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.