Transcript: ENSRNOT00000015287.9 Tm2d3-201

Description

TM2 domain containing 3 [Source:RGD Symbol;Acc:1564929]

Gene Synonyms

LOC292995, RGD1564929

Location

About this transcript

This transcript has 5 exons, is annotated with 10 domains and features, is associated with 144 variant alleles and maps to 127 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000094329.2	Tm2d3-202	947	261aa	ENSRNOP00000091784.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ACD9 A6JBN3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000015287.9	Tm2d3-201	903	230aa	ENSRNOP00000015287.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JBN4 D3ZQU1	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 903 bps, Translation length: 230 residues

Version

ENSRNOT00000015287.9

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.