Transcript: ENSRNOT00000014785.7 Itgb1-201

Description

integrin subunit beta 1 [Source:RGD Symbol;Acc:2927]

Gene Synonyms

LOC102556297

Location

Primary_assembly 19: 73,621,826-73,650,259 forward strand.

About this transcript

This transcript has 16 exons, is annotated with 60 domains and features, is associated with 18 variant alleles and maps to 225 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000010966.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000164127.1	Itgb1-204	3551	819aa	ENSRNOP00000105381.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000109602.2	Itgb1-202	3799	798aa	ENSRNOP00000093150.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GKJ1 A6KJ65	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000134870.1	Itgb1-203	3564	804aa	ENSRNOP00000108731.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000014785.7	Itgb1-201	3559	801aa	ENSRNOP00000014785.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JSK5	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 16, Coding exons: 15, Transcript length: 3,559 bps, Translation length: 801 residues

Version

ENSRNOT00000014785.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSRNOT00000014785.7 Itgb1-201

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Transcript: ENSRNOT00000014785.7 Itgb1-201

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