Transcript: ENSRNOT00000014783.10 Dop1a-201

Description

DOP1 leucine zipper like protein A [Source:RGD Symbol;Acc:1305534]

Gene Synonyms

Dopey1, LOC315864, RGD1305534

Location

Primary_assembly 8: 96,295,328-96,398,652 forward strand.

About this transcript

This transcript has 39 exons, is annotated with 32 domains and features, is associated with 601 variant alleles and maps to 369 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000022847.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000014783.10	Dop1a-201	8625	2469aa	ENSRNOP00000014783.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A0Y2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000143181.1	Dop1a-203	7896	2452aa	ENSRNOP00000102517.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000114743.2	Dop1a-202	7748	2462aa	ENSRNOP00000083794.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A0N6	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 39, Coding exons: 37, Transcript length: 8,625 bps, Translation length: 2,469 residues

Version

ENSRNOT00000014783.10

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSRNOT00000014783.10 Dop1a-201

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Transcript: ENSRNOT00000014783.10 Dop1a-201

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