Transcript: ENSRNOT00000014546.5 Sptlc1-201

Description

serine palmitoyltransferase, long chain base subunit 1 [Source:RGD Symbol;Acc:1307140]

Gene Synonyms

LCB 1, LOC361213, Lcb1, RGD1306617, SPT 1, Spt1

Location

About this transcript

This transcript has 15 exons, is annotated with 12 domains and features, is associated with 75 variant alleles and maps to 244 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000014546.5	Sptlc1-201	3034	473aa	ENSRNOP00000014546.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A2H2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000113906.1	Sptlc1-203	3269	467aa	ENSRNOP00000085605.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A3Q5	-
ENSRNOT00000103100.1	Sptlc1-202	3014	470aa	ENSRNOP00000082531.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZUP8	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 3,034 bps, Translation length: 473 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: D4A2H2

Version

ENSRNOT00000014546.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.