Transcript: ENSRNOT00000014041.7 Mmp7-201

Description

matrix metallopeptidase 7 [Source:RGD Symbol;Acc:3100]

Gene Synonyms

MMP-7, MPMM

Location

About this transcript

This transcript has 6 exons, is annotated with 22 domains and features, is associated with 67 variant alleles and maps to 147 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000100430.2	Mmp7-202	841	273aa	ENSRNOP00000079054.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZMN5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000014041.7	Mmp7-201	1018	267aa	ENSRNOP00000014041.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JN40 P50280	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,018 bps, Translation length: 267 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P50280

Version

ENSRNOT00000014041.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.