Transcript: ENSRNOT00000013563.9 Sdcbp-201

Description

syndecan binding protein [Source:RGD Symbol;Acc:621497]

Gene Synonyms

LOC108350925, TACIP18, mda-9

Location

About this transcript

This transcript has 9 exons, is annotated with 16 domains and features, is associated with 160 variant alleles and maps to 158 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000137222.1	Sdcbp-205	2568	356aa	ENSRNOP00000106015.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000115856.2	Sdcbp-204	2418	306aa	ENSRNOP00000081603.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9JI92	-
ENSRNOT00000098340.2	Sdcbp-202	2342	300aa	ENSRNOP00000079793.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6G5R4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000162656.1	Sdcbp-206	2189	296aa	ENSRNOP00000100964.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000013563.9	Sdcbp-201	2008	278aa	ENSRNOP00000013563.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2Q6V7	-
ENSRNOT00000110124.2	Sdcbp-203	937	199aa	ENSRNOP00000084825.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A1Z6	-

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 2,008 bps, Translation length: 278 residues

Version

ENSRNOT00000013563.9

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.