Transcript: ENSRNOT00000013126.9 Sbf2-201

Description

SET binding factor 2 [Source:RGD Symbol;Acc:1588657]

Gene Synonyms

LOC308934, LOC691036, MGC188607, Mtmr13, RGD1559442

Location

Primary_assembly 1: 173,788,187-174,154,522 reverse strand.

About this transcript

This transcript has 40 exons, is annotated with 29 domains and features, is associated with 645 variant alleles and maps to 435 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000009812.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000107654.2	Sbf2-204	6617	1904aa	ENSRNOP00000083800.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A009	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000107066.2	Sbf2-203	6542	1879aa	ENSRNOP00000095074.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AIY9	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000108689.2	Sbf2-205	6521	1872aa	ENSRNOP00000089161.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A7K6	-
ENSRNOT00000077125.3	Sbf2-202	6446	1847aa	ENSRNOP00000071975.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K1T3	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000173978.1	Sbf2-207	6409	1797aa	ENSRNOP00000108880.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000013126.9	Sbf2-201	6383	1826aa	ENSRNOP00000013126.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B5DEJ9	-
ENSRNOT00000123187.1	Sbf2-206	6377	1824aa	ENSRNOP00000106242.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 40, Coding exons: 40, Transcript length: 6,383 bps, Translation length: 1,826 residues

Version

ENSRNOT00000013126.9

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSRNOT00000013126.9 Sbf2-201

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Transcript: ENSRNOT00000013126.9 Sbf2-201

Summary

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