Transcript: ENSRNOT00000012644.5 Hcn4-201

Description

hyperpolarization activated cyclic nucleotide-gated potassium channel 4 [Source:RGD Symbol;Acc:71065]

Location

About this transcript

This transcript has 8 exons, is annotated with 51 domains and features, is associated with 54 variant alleles and maps to 154 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000103911.1	Hcn4-202	4609	1230aa	ENSRNOP00000080600.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZPZ1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000012644.5	Hcn4-201	3960	1198aa	ENSRNOP00000012644.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0H2UHH6 Q9JKA7	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 3,960 bps, Translation length: 1,198 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9JKA7

Version

ENSRNOT00000012644.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.