Transcript: ENSRNOT00000012340.5 Thra-201

Description

thyroid hormone receptor alpha [Source:RGD Symbol;Acc:3857]

Gene Synonyms

C-erbA-alpha, ERBA1, Thra1, c-erbA-1, c-erbA-alpha2, c-erbAalpha2

Location

Primary_assembly 10: 84,212,135-84,225,657 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 36 domains and features, is associated with 107 variant alleles and maps to 230 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000009066.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000104844.2	Thra-203	2458	492aa	ENSRNOP00000093530.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AIY7 A6HIU2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000087346.3	Thra-202	2298	467aa	ENSRNOP00000072739.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P63059-2	-
ENSRNOT00000012340.5	Thra-201	1931	486aa	ENSRNOP00000012340.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3V764	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,931 bps, Translation length: 486 residues

Version

ENSRNOT00000012340.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSRNOT00000012340.5 Thra-201

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Transcript: ENSRNOT00000012340.5 Thra-201

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