Transcript: ENSRNOT00000011000.7 Thumpd2-201

Description

THUMP domain containing 2 [Source:RGD Symbol;Acc:1306878]

Gene Synonyms

LOC313851, MGC108999

Location

Primary_assembly 6: 19,677,046-19,728,942 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 15 domains and features, is associated with 214 variant alleles and maps to 148 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000008291.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000087891.3	Thumpd2-203	1966	586aa	ENSRNOP00000075202.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2KA02	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000011000.7	Thumpd2-201	1834	549aa	ENSRNOP00000011000.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A475	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000084499.3	Thumpd2-202	1693	502aa	ENSRNOP00000071513.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5FVM9	-
ENSRNOT00000100728.2	Thumpd2-204	1597	490aa	ENSRNOP00000086376.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A3I0	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,834 bps, Translation length: 549 residues

Version

ENSRNOT00000011000.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSRNOT00000011000.7 Thumpd2-201

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Transcript: ENSRNOT00000011000.7 Thumpd2-201

Summary

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