Transcript: ENSRNOT00000010893.8 Tcea1l1-201

Description

transcription elongation factor A1-like 1 [Source:RGD Symbol;Acc:1591965]

Gene Synonyms

AABR07017110.1, LOC362479, LOC498453, MGC116288

Location

About this transcript

This transcript has 10 exons, is annotated with 27 domains and features, is associated with 131 variant alleles and maps to 294 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000010893.8	Tcea1l1-201	2354	301aa	ENSRNOP00000010893.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2Q4Y0 A6K054	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000104892.2	Tcea1l1-202	1918	277aa	ENSRNOP00000084958.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4KLL0	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 2,354 bps, Translation length: 301 residues

Version

ENSRNOT00000010893.8

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.