Transcript: ENSRNOT00000010433.9 Plod1-201

Description

procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 [Source:RGD Symbol;Acc:621382]

Gene Synonyms

LH1, Plod

Location

About this transcript

This transcript has 19 exons, is annotated with 15 domains and features, is associated with 83 variant alleles and maps to 256 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000010433.9	Plod1-201	3267	802aa	ENSRNOP00000010433.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZQ74	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000117604.2	Plod1-203	2723	687aa	ENSRNOP00000087676.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GFD5	-
ENSRNOT00000097241.2	Plod1-202	730	226aa	ENSRNOP00000080105.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZPY4	-

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 3,267 bps, Translation length: 802 residues

Version

ENSRNOT00000010433.9

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.