Transcript: ENSRNOT00000009173.9 Arid1a-201

Description

AT-rich interaction domain 1A [Source:RGD Symbol;Acc:1310500]

Gene Synonyms

LOC297867

Location

About this transcript

This transcript has 20 exons, is annotated with 87 domains and features, is associated with 126 variant alleles and maps to 271 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000009173.9	Arid1a-201	8571	2291aa	ENSRNOP00000009173.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A3E3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000102003.2	Arid1a-202	8400	2234aa	ENSRNOP00000088707.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AJE2	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 20, Coding exons: 20, Transcript length: 8,571 bps, Translation length: 2,291 residues

Version

ENSRNOT00000009173.9

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.